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  5. Tin_g03443

Tin_g03443


Description : E3 ubiquiTin ligase & original description: none


Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03443

Target Alias Description ECC score Gene Family Method Actions
Adi_g020571 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g49013 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10797 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32249 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g16070 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0350.g066547 No alias E3 ubiquitin ligase & original description: CDS=532-2124 0.04 OrthoFinder output from all 47 species
Cba_g01219 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05312 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72117 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01655 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_03616 No alias U-box domain-containing protein 62 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g44015 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01053 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09636 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32791 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14308 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016014 No alias E3 ubiquitin ligase & original description: CDS=1-342 0.03 OrthoFinder output from all 47 species
Sam_g12559 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49248 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g009340.3.1 Solyc04g009340 U-box domain-containing protein 63 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g16841 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!