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  5. Tin_g03358

Tin_g03358


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03358
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00125480 KAN2,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT2G06020 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
AT4G04605 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g080178 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aev_g12428 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g08342 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14535 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g01879 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04252 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g29692 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene32844.t1 Aspi01Gene32844 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene56415.t1 Aspi01Gene56415 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59765.t1 Aspi01Gene59765 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03918 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g16380 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g26945 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.21G027900.1 Ceric.21G027900 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G025700.1 Ceric.22G025700 transcription factor *(CLAUSA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G006800.1 Ceric.33G006800 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre12.g495100 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Dde_g08284 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16600 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00938 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21970 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g29468 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31337 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033515001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_25992 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g25820.2 LOC_Os08g25820 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g21596 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g36484 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g01611 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
MA_10430912g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_52379g0010 No alias G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Nbi_g05367 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09077 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09793 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Nbi_g15270 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g19105 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19106 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01216 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g43178 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06853 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.03 OrthoFinder output from all 47 species
Sam_g08333 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g40620 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo423935 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Solyc03g006150.2.1 Solyc03g006150 Putative Myb family transcription factor At1g14600... 0.03 OrthoFinder output from all 47 species
Solyc05g055940.3.1 PHL1, Solyc05g055940 PHR1 transcription factor involved in proline synthesis... 0.03 OrthoFinder output from all 47 species
Solyc10g085620.2.1 Solyc10g085620 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Solyc12g006280.3.1 Solyc12g006280 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g29568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014339_P001 Zm00001e014339 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 130 176
IPR001005 SANT/Myb 40 90
No external refs found!