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  5. Tin_g03268

Tin_g03268 (SFD4, FADC, FAD6)


Aliases : SFD4, FADC, FAD6

Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0002742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03268
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Adi_g024275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087305 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aev_g12814 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Aob_g07184 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Aop_g01297 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene53241.t1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G044600.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G095400.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003874001 SFD4, FADC, FAD6 Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus 0.04 OrthoFinder output from all 47 species
Len_g41148 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.08 OrthoFinder output from all 47 species
Lfl_g07005 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Msp_g07910 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Nbi_g40241 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.09 OrthoFinder output from all 47 species
Pnu_g11735 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Ppi_g33242 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Sam_g24005 No alias delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Spa_g19121 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 157 406
No external refs found!