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  5. Tin_g03055

Tin_g03055


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g03055

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00168800 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
AT4G22820 No alias A20/AN1-like zinc finger family protein 0.03 OrthoFinder output from all 47 species
Ala_g01093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g49084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g57890.1 LOC_Os03g57890 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os08g39450.1 LOC_Os08g39450 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Msp_g35953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g12305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo270230 No alias Zinc finger A20 and AN1 domain-containing... 0.05 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e034520_P001 Zm00001e034520 Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 120 154
IPR002653 Znf_A20 24 46
No external refs found!