1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g02978

Tin_g02978


Description : not classified & original description: none


Gene families : OG0000006 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02978
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Adi_g009615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g14158 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g00385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14572 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g53521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64051.t1 Aspi01Gene64051 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67012 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G062400.1 Ceric.04G062400 not classified & original description: pacid=50630452... 0.04 OrthoFinder output from all 47 species
Ceric.15G046100.1 Ceric.15G046100 not classified & original description: pacid=50639635... 0.03 OrthoFinder output from all 47 species
Ceric.31G033600.1 Ceric.31G033600 not classified & original description: pacid=50574842... 0.02 OrthoFinder output from all 47 species
Len_g08501 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21394 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22822 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g49690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g32367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g19419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g58820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g00472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g00480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g15169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g19798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g19930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24490 ORF102 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27614 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49943 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g50026 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51400 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g33356 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g43651 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 74 131
No external refs found!