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  5. Tin_g02904

Tin_g02904


Description : not classified & original description: none


Gene families : OG0000629 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000629_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02904

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g02884.1 LOC_Os01g02884 DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g35260.1 LOC_Os04g35260 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g43492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c17_19726V3.1 Pp3c17_19726 RNA helicase family protein 0.02 OrthoFinder output from all 47 species
Solyc01g006970.4.1 Solyc01g006970 DExH-box ATP-dependent RNA helicase DExH1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR014720 dsRBD_dom 1065 1102
IPR011545 DEAD/DEAH_box_helicase_dom 255 409
IPR011709 DEAD-box_helicase_OB_fold 865 946
IPR007502 Helicase-assoc_dom 709 782
IPR001650 Helicase_C 516 645
No external refs found!