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  5. Tin_g02895

Tin_g02895 (SFR6)


Aliases : SFR6

Description : component *(MED16) of tail module of MEDIATOR transcription co-activator complex & original description: none


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02895

Target Alias Description ECC score Gene Family Method Actions
AT4G04920 SFR6 sensitive to freezing 6 0.02 OrthoFinder output from all 47 species
Adi_g019103 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ala_g22100 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Aop_g63638 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species
Ceric.22G016300.1 SFR6, Ceric.22G016300 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Ceric.22G020500.1 SFR6, Ceric.22G020500 component *(MED16) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Cre04.g220600 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g07130 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
GSVIVT01004519001 No alias Mediator of RNA polymerase II transcription subunit 16... 0.02 OrthoFinder output from all 47 species
Gb_16787 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os10g35560.1 SFR6, LOC_Os10g35560 component MED16 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
MA_176669g0010 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Mp4g19580.1 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!