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  5. Tin_g02870

Tin_g02870


Description : not classified & original description: none


Gene families : OG0005880 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02870

Target Alias Description ECC score Gene Family Method Actions
Aop_g69062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo182522 No alias Polyadenylate-binding protein 8 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Zm00001e041627_P001 Zm00001e041627 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e042214_P001 Zm00001e042214 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 540 600
IPR000504 RRM_dom 343 413
IPR000504 RRM_dom 4 71
IPR000504 RRM_dom 664 744
IPR000504 RRM_dom 770 838
No external refs found!