Tin_g02798


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02798

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00087430 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g003816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g006593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g075132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099216 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25320 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26153 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13877 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06102 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08796 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12052 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20139 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28322 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28699 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0059.g034605 No alias ssDNA-binding protein *(OSB) & original description: CDS=21-2777 0.03 OrthoFinder output from all 47 species
Cba_g04741 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05882 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G022800.1 Ceric.06G022800 not classified & original description: pacid=50620328... 0.03 OrthoFinder output from all 47 species
Ceric.07G078100.1 OTP84, Ceric.07G078100 not classified & original description: pacid=50626860... 0.03 OrthoFinder output from all 47 species
Ceric.18G023200.1 Ceric.18G023200 not classified & original description: pacid=50622130... 0.05 OrthoFinder output from all 47 species
Ceric.21G054200.1 Ceric.21G054200 not classified & original description: pacid=50602892... 0.04 OrthoFinder output from all 47 species
Ceric.23G075200.1 Ceric.23G075200 not classified & original description: pacid=50610693... 0.06 OrthoFinder output from all 47 species
Ceric.23G083100.1 Ceric.23G083100 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.24G054500.1 OTP86, Ceric.24G054500 not classified & original description: pacid=50628633... 0.03 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.03 OrthoFinder output from all 47 species
Ceric.30G037100.1 Ceric.30G037100 not classified & original description: pacid=50608918... 0.03 OrthoFinder output from all 47 species
Ceric.34G063100.1 Ceric.34G063100 not classified & original description: pacid=50623551... 0.03 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g02368 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18763 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21248 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43249 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43262 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45442 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07748 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50137 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03994 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28235 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_8319g0010 CRR2 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24045 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20232 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30350 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63395 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63397 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63498 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63817 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63879 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63892 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11000 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g12066 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo102435 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Smo97289 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.03 OrthoFinder output from all 47 species
Spa_g01489 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01967 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g07311 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09909 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13686 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g17487 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18928 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g19938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21449 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23976 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27671 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g44754 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46182 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49488 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51828 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30037 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016542_P001 Zm00001e016542 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 167 215
IPR002885 Pentatricopeptide_repeat 369 417
IPR002885 Pentatricopeptide_repeat 268 315
IPR002885 Pentatricopeptide_repeat 471 518
IPR002885 Pentatricopeptide_repeat 344 368
IPR002885 Pentatricopeptide_repeat 580 604
IPR002885 Pentatricopeptide_repeat 445 469
No external refs found!