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  5. Tin_g02797

Tin_g02797 (RBL1, ATRBL1)


Aliases : RBL1, ATRBL1

Description : protease *(RBL) & original description: none


Gene families : OG0000668 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000668_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02797
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00044730 RBL1, ATRBL1,... Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
AT1G52580 RBL5, ATRBL5 RHOMBOID-like protein 5 0.03 OrthoFinder output from all 47 species
AT2G29050 RBL1, ATRBL1 RHOMBOID-like 1 0.02 OrthoFinder output from all 47 species
Als_g05510 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02521 RBL1, ATRBL1 protease *(RBL) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43086 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0183.g056478 RBL1, ATRBL1 protease *(RBL) & original description: CDS=777-1763 0.05 OrthoFinder output from all 47 species
Ceric.13G018300.1 RBL1, ATRBL1,... protease *(RBL) & original description: pacid=50636147... 0.03 OrthoFinder output from all 47 species
Dde_g01404 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17380 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25784 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01008957001 KOM Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01017301001 RBL1, ATRBL1 Protein degradation.peptidase families.serine-type... 0.02 OrthoFinder output from all 47 species
Gb_20606 RBL4, ATRBL4 protease (RBL) 0.01 OrthoFinder output from all 47 species
LOC_Os08g43320.1 RBL2, ATRBL2,... protease (RBL) 0.02 OrthoFinder output from all 47 species
Len_g13142 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05981 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09832 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10680 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g61050 RBL1, ATRBL1 protease *(RBL) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018958 RBL1, ATRBL1 protease *(RBL) & original description: CDS=1-1146 0.03 OrthoFinder output from all 47 species
Solyc11g013320.2.1 KOM, Solyc11g013320 protease (RBL) 0.03 OrthoFinder output from all 47 species
Spa_g57345 RBL1, ATRBL1 protease *(RBL) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 92 233
No external refs found!