1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g02640

Tin_g02640


Description : scaffold nucleoporin of nuclear pore complex *(RAE1) & original description: none


Gene families : OG0004854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004854_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02640
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000215.115 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.01 OrthoFinder output from all 47 species
Zm00001e039887_P001 Zm00001e039887 RAE1 scaffold nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 27 53
IPR001680 WD40_repeat 111 140
No external refs found!