1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g02628

Tin_g02628


Description : RING-H2-class ATL-subclass E3 ubiquiTin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02628

Target Alias Description ECC score Gene Family Method Actions
AT2G42350 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33565 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G53110 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g10315 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g06027 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014251 ATL2, TL2 not classified & original description: CDS=1-1224 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0415.g068611 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.17G012000.1 Ceric.17G012000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g30862 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g06581 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ehy_g14073 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
LOC_Os05g29710.1 LOC_Os05g29710 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Msp_g12835 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Msp_g19472 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g02852 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Nbi_g03518 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g34706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g112340.1.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc09g075320.1.1 ATL2, TL2, Solyc09g075320 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc11g010330.3.1 Solyc11g010330 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g24937 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 90 133
No external refs found!