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  5. Tin_g02565

Tin_g02565


Description : beta-type-5 component *(PBE) of 26S proteasome & original description: none


Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02565
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00083100 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
AT1G13060 PBE1 20S proteasome beta subunit E1 0.09 OrthoFinder output from all 47 species
AT3G26340 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.03 OrthoFinder output from all 47 species
Adi_g022653 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Adi_g080574 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aev_g09083 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Ala_g01174 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Als_g01614 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Aop_g00419 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.07 OrthoFinder output from all 47 species
Azfi_s0001.g000499 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Ceric.28G031800.1 Ceric.28G031800 beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.05 OrthoFinder output from all 47 species
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.11 OrthoFinder output from all 47 species
Dcu_g03476 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
GSVIVT01010375001 No alias Protein degradation.26S proteasome.20S core... 0.03 OrthoFinder output from all 47 species
Gb_01835 No alias component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os06g06030.1 LOC_Os06g06030 component beta type-5 of 26S proteasome 0.12 OrthoFinder output from all 47 species
Len_g05178 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Lfl_g12238 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
MA_2177g0010 PBE1 component beta type-5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
MA_5918g0010 PBE1 component beta type-5 of 26S proteasome 0.02 OrthoFinder output from all 47 species
Mp2g06230.1 No alias component beta type-5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
Msp_g07676 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Nbi_g43610 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Ore_g04318 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.04 OrthoFinder output from all 47 species
Pir_g00866 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.05 OrthoFinder output from all 47 species
Sam_g14103 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo270977 No alias Protein degradation.26S proteasome.20S core... 0.02 OrthoFinder output from all 47 species
Solyc05g056160.3.1 Solyc05g056160 component beta type-5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Spa_g02376 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Spa_g05432 No alias beta-type-5 component *(PBE) of 26S proteasome &... 0.06 OrthoFinder output from all 47 species
Zm00001e036472_P001 Zm00001e036472 component beta type-5 of 26S proteasome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043461 proton-transporting ATP synthase complex assembly IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0070071 proton-transporting two-sector ATPase complex assembly IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 59 239
No external refs found!