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  5. Tin_g02529

Tin_g02529 (PTAC4, VIPP1)


Aliases : PTAC4, VIPP1

Description : protein involved in plastid membrane fusion *(VIPP) & original description: none


Gene families : OG0002497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002497_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02529

Target Alias Description ECC score Gene Family Method Actions
Ceric.25G000800.1 PTAC4, VIPP1,... protein involved in plastid membrane fusion *(VIPP) &... 0.02 OrthoFinder output from all 47 species
Mp5g20680.1 PTAC4, VIPP1 VIPP protein involved in plastid membrane fusion 0.02 OrthoFinder output from all 47 species
Ore_g16052 PTAC4, VIPP1 protein involved in plastid membrane fusion *(VIPP) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007157 PspA_IM30 125 337
No external refs found!