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  5. Tin_g02489

Tin_g02489


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02489
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Als_g00745 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00398 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34228 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03225 No alias Trihelix-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g03808 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os04g45940.1 LOC_Os04g45940 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g28209 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04985 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 24 115
No external refs found!