Tin_g02372

Description : component *(SPCs2) of SPC endoplasmic signal peptidase complex & original description: none

Gene families : OG0005036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005036_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g02372
Cluster	HCCA: Cluster_140

Target	Alias	Description	ECC score	Gene Family Method
AT2G39960	No alias	Microsomal signal peptidase 25 kDa subunit (SPC25)	0.02	OrthoFinder output from all 47 species
Aev_g02944	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.02	OrthoFinder output from all 47 species
Azfi_s0003.g007949	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Cba_g30306	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.02	OrthoFinder output from all 47 species
Cre12.g524200	No alias	Protein modification.peptide maturation.endomembrane...	0.03	OrthoFinder output from all 47 species
Dac_g08152	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.06	OrthoFinder output from all 47 species
Dde_g00300	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.04	OrthoFinder output from all 47 species
LOC_Os04g36859.1	LOC_Os04g36859	component SPCs2 of SPC endoplasmic signal peptidase complex	0.06	OrthoFinder output from all 47 species
Lfl_g41057	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Msp_g00880	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.03	OrthoFinder output from all 47 species
Nbi_g22830	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.04	OrthoFinder output from all 47 species
Pp3c8_24950V3.1	Pp3c8_24950	Microsomal signal peptidase 25 kDa subunit (SPC25)	0.02	OrthoFinder output from all 47 species
Solyc04g072032.1.1	Solyc04g072032	component SPCs2 of SPC endoplasmic signal peptidase complex	0.04	OrthoFinder output from all 47 species
Spa_g15635	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.09	OrthoFinder output from all 47 species
Spa_g53463	No alias	component *(SPCs2) of SPC endoplasmic signal peptidase...	0.09	OrthoFinder output from all 47 species
Zm00001e007990_P001	Zm00001e007990	component SPCs2 of SPC endoplasmic signal peptidase complex	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005787	signal peptidase complex	IEA	Interproscan
BP	GO:0006465	signal peptide processing	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016485	protein processing	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051604	protein maturation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:0140534	endoplasmic reticulum protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1905368	peptidase complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0098772	molecular function regulator activity	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009582	Spc2/SPCS2	21	178

External Links

No external refs found!

Tin_g02372

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation