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  5. Tin_g02193

Tin_g02193


Description : subfamily ABCG transporter & original description: none


Gene families : OG0001702 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001702_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02193

Target Alias Description ECC score Gene Family Method Actions
Adi_g055915 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48611 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20785.t1 Aspi01Gene20785 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037686 No alias subfamily ABCG transporter & original description: CDS=355-3330 0.04 OrthoFinder output from all 47 species
Cre02.g112550 ATNAP12, NAP12 ABC transporter G family member 25 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os10g30610.1 LOC_Os10g30610 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_10426482g0010 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_331088g0010 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
MA_8900862g0010 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g25783 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g42890 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018653 No alias subfamily ABCG transporter & original description: CDS=36-3518 0.03 OrthoFinder output from all 47 species
Sam_g30136 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo411220 No alias Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Solyc04g025170.4.1 Solyc04g025170 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e004692_P001 Zm00001e004692 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e008651_P001 Zm00001e008651 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 596 747
IPR043926 ABCG_dom 776 1184
No external refs found!