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  5. Tin_g02161

Tin_g02161


Description : not classified & original description: none


Gene families : OG0001451 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001451_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02161
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00207790 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AT1G03830 No alias guanylate-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g109266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16605 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.33G001500.1 Ceric.33G001500 not classified & original description: pacid=50606915... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020999.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g20389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01021122001 No alias No description available 0.03 OrthoFinder output from all 47 species
Ore_g43652 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1086.g027942 No alias not classified & original description: CDS=176-2989 0.03 OrthoFinder output from all 47 species
Zm00001e026525_P002 Zm00001e026525 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e032422_P001 Zm00001e032422 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0032324 molybdopterin cofactor biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0043545 molybdopterin cofactor metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051189 prosthetic group metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR015894 Guanylate-bd_N 34 292
IPR003191 Guanylate-bd/ATL_C 297 601
No external refs found!