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  5. Tin_g02127

Tin_g02127


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0007625 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007625_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02127
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Aop_g05778 No alias regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
Aop_g11118 No alias regulatory protein *(CORD) of cortical microtubule... 0.09 OrthoFinder output from all 47 species
Aspi01Gene56585.t1 Aspi01Gene56585 regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Aspi01Gene61403.t1 Aspi01Gene61403 regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Azfi_s0791.g087244 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Ceric.02G027600.1 Ceric.02G027600 regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Ceric.37G010000.1 Ceric.37G010000 regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Dcu_g12553 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species
Msp_g14974 No alias regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Nbi_g05857 No alias regulatory protein *(CORD) of cortical microtubule... 0.11 OrthoFinder output from all 47 species
Nbi_g30819 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Spa_g50473 No alias regulatory protein *(CORD) of cortical microtubule... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 782
No external refs found!