Aliases : ATCUL3A, ATCUL3, CUL3A, CUL3
Description : scaffold component *(CUL3) of CUL3-BTB E3 ligase complexes & original description: none
Gene families : OG0000920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000920_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g02089 | |
Cluster | HCCA: Cluster_15 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G46210 | ATCUL4, CUL4 | cullin4 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g14747 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G009200.1 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g12615 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g57290.1 | ATCUL4, CUL4,... | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g07400.1 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g02234 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Mp1g07340.1 | ATCUL4, CUL4 | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g17472 | ATCUL4, CUL4 | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g39890 | AXR6, ATCUL1, CUL1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g01368 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g01666 | ATCUL3A, ATCUL3,... | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g09683 | No alias | scaffold component *(CUL3) of CUL3-BTB E3 ligase... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g13649 | No alias | scaffold component *(CUL4) of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Smo98006 | ATCUL3A, ATCUL3,... | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g010820.3.1 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005919_P001 | ATCUL4, CUL4,... | scaffold component CUL4 of CUL4-DDB1 ubiquitination... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040141_P001 | ATCUL3A, ATCUL3,... | scaffold component CUL3 of CUL3-BTB E3 ligase complexes | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEA | Interproscan |
MF | GO:0031625 | ubiquitin protein ligase binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000159 | protein phosphatase type 2A complex | IEP | HCCA |
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
BP | GO:0007165 | signal transduction | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
CC | GO:0008287 | protein serine/threonine phosphatase complex | IEP | HCCA |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
MF | GO:0016853 | isomerase activity | IEP | HCCA |
MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
BP | GO:0018208 | peptidyl-proline modification | IEP | HCCA |
MF | GO:0019208 | phosphatase regulator activity | IEP | HCCA |
MF | GO:0019888 | protein phosphatase regulator activity | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0046907 | intracellular transport | IEP | HCCA |
BP | GO:0051169 | nuclear transport | IEP | HCCA |
BP | GO:0051641 | cellular localization | IEP | HCCA |
BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1903293 | phosphatase complex | IEP | HCCA |
No external refs found! |