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  5. Tin_g02083

Tin_g02083


Description : not classified & original description: none


Gene families : OG0006138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g02083

Target Alias Description ECC score Gene Family Method Actions
Adi_g055201 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01782 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.06G010100.1 Ceric.06G010100 not classified & original description: pacid=50619887... 0.05 OrthoFinder output from all 47 species
Ceric.37G045200.1 Ceric.37G045200 not classified & original description: pacid=50615747... 0.05 OrthoFinder output from all 47 species
Dcu_g05594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 458 527
IPR001202 WW_dom 356 383
No external refs found!