Tin_g02061 (ALS1, ATTAP2, TAP2)

Aliases : ALS1, ATTAP2, TAP2

Description : subfamily ABCB transporter & original description: none

Gene families : OG0001464 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001464_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g02061

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00228170	ALS1, ATTAP2,...	Solute transport.primary active transport.ABC...	0.04	OrthoFinder output from all 47 species
Aspi01Gene12421.t1	Aspi01Gene12421	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021127.70	ALS1, ATTAP2, TAP2	ABC transporter B family member 25 OS=Oryza sativa...	0.01	OrthoFinder output from all 47 species
Cre02.g083354	ALS1, ATTAP2, TAP2	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
GSVIVT01032404001	ATTAP1, TAP1	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Mp5g19560.1	ALS1, ATTAP2, TAP2	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc03g114950.2.1	ALS1, ATTAP2,...	subfamily ABCB transporter	0.05	OrthoFinder output from all 47 species
Spa_g54825	ALS1, ATTAP2, TAP2	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	404	556
IPR011527	ABC1_TM_dom	60	335

External Links

No external refs found!

Tin_g02061 (ALS1, ATTAP2, TAP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation