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  5. Tin_g01935

Tin_g01935 (XBAT31)


Aliases : XBAT31

Description : E3 ubiquiTin ligase *(XBAT3) & original description: none


Gene families : OG0000851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01935
Cluster HCCA: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
Adi_g072170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s3502.g115912 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=110-1369 0.03 OrthoFinder output from all 47 species
Dac_g19831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g33256 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56727 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015667 XBAT31 not classified & original description: CDS=1-597 0.03 OrthoFinder output from all 47 species
Zm00001e018493_P002 XBAT31, Zm00001e018493 RING-HC-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e027635_P001 XBAT31, Zm00001e027635 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e038483_P001 XBAT31, Zm00001e038483 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 20 81
IPR002110 Ankyrin_rpt 84 141
IPR002110 Ankyrin_rpt 163 237
No external refs found!