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  5. Tin_g01914

Tin_g01914 (LWD1, ATAN11)


Aliases : LWD1, ATAN11

Description : circadian clock activation factor *(LWD) & original description: none


Gene families : OG0002975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002975_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01914

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271900 LWD1, ATAN11,... Multi-process regulation.circadian clock.morning element... 0.03 OrthoFinder output from all 47 species
AMTR_s00040p00131380 LWD1, ATAN11,... Multi-process regulation.circadian clock.morning element... 0.02 OrthoFinder output from all 47 species
Als_g37738 LWD1, ATAN11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000204.79 LWD1, ATAN11 WD repeat-containing protein LWD1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01038651001 ATTTG1, TTG, TTG1, URM23 Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g32430.1 LWD1, ATAN11,... WD repeat-containing protein LWD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_637135g0010 LWD1, ATAN11 LWD circadian clock activation factor 0.04 OrthoFinder output from all 47 species
Mp5g03900.1 LWD1, ATAN11 LWD circadian clock activation factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!