Tin_g01868

Description : pecTin methylesterase & original description: none

Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g01868
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00106p00092510	evm_27.TU.AmTr_v1...	Cell wall.pectin.homogalacturonan.modification and...	0.03	OrthoFinder output from all 47 species
Adi_g051561	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g20368	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene05718.t1	Aspi01Gene05718	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g11068	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g15370	No alias	pectin methylesterase & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g09802	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g19236	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g40175	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g03614	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g25901	No alias	pectin methylesterase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g59766	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004950	No alias	pectin methylesterase & original description: CDS=716-1846	0.02	OrthoFinder output from all 47 species
Spa_g11007	No alias	pectin methylesterase & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55676	No alias	pectin methylesterase & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	Interproscan
BP	GO:0042545	cell wall modification	IEA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	66	353

External Links

No external refs found!

Tin_g01868

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation