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  5. Tin_g01818

Tin_g01818


Description : not classified & original description: none


Gene families : OG0001257 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001257_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01818
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Aob_g36461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077300.1 Ceric.11G077300 not classified & original description: pacid=50596018... 0.03 OrthoFinder output from all 47 species
Ehy_g13384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g39712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12852 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13693 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001851 No alias not classified & original description: CDS=1-1377 0.04 OrthoFinder output from all 47 species
Zm00001e009475_P001 Zm00001e009475 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
InterPro domains Description Start Stop
IPR024771 SUZ 174 220
IPR001374 R3H_dom 81 130
No external refs found!