1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g01680

Tin_g01680 (BPC3, ATBPC3)


Aliases : BPC3, ATBPC3

Description : BBR/BPC-type transcription factor & original description: none


Gene families : OG0000626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000626_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01680

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00254090 BPC3, ATBPC3,... RNA biosynthesis.transcriptional activation.BBR/BPC... 0.02 OrthoFinder output from all 47 species
Adi_g119680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G051000.1 BPC3, ATBPC3,... BBR/BPC-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01011589001 ATBPC1, BPC1, BBR RNA biosynthesis.transcriptional activation.BBR/BPC... 0.01 OrthoFinder output from all 47 species
Len_g25968 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26211 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16969 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43515 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022516 ATBPC2, BPC2, BBR/BPC2 subunit beta of co-translational insertion system Sec61... 0.04 OrthoFinder output from all 47 species
Spa_g55994 BPC3, ATBPC3 BBR/BPC-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR010409 GAGA-bd_tscrpt_act 1 302
No external refs found!