1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g01595

Tin_g01595


Description : not classified & original description: none


Gene families : OG0003174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003174_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01595
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Als_g10391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36269.t1 Aspi01Gene36269 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G096600.1 Ceric.11G096600 not classified & original description: pacid=50596230... 0.03 OrthoFinder output from all 47 species
Ceric.30G030000.1 Ceric.30G030000 not classified & original description: pacid=50608198... 0.05 OrthoFinder output from all 47 species
Dcu_g38589 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21940 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10427843g0020 No alias RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pir_g63486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g015500.4.1 Solyc05g015500 RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g53527 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021906_P002 Zm00001e021906 RanBP2-type zinc finger protein At1g67325 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001876 Znf_RanBP2 39 69
IPR001876 Znf_RanBP2 252 281
IPR001876 Znf_RanBP2 202 232
No external refs found!