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  5. Tin_g01189

Tin_g01189 (ATSCO1/CPEF-G, SCO1, ATSCO1)


Aliases : ATSCO1/CPEF-G, SCO1, ATSCO1

Description : translation elongation factor *(EF-G) & original description: none


Gene families : OG0002078 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002078_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01189
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00031690 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AT1G62750 ATSCO1/CPEF-G,... Translation elongation factor EFG/EF2 protein 0.12 OrthoFinder output from all 47 species
Adi_g024951 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Adi_g087916 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Aev_g08240 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ala_g02375 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Als_g15105 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.08 OrthoFinder output from all 47 species
Aob_g05315 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Aop_g06164 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene31691.t1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0027.g023510 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.08 OrthoFinder output from all 47 species
Cba_g01251 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Ceric.04G106300.1 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.13 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.56 No alias Elongation factor G-1, mitochondrial OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre02.g076250 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
Dac_g00996 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g08930 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Dde_g17873 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g01583 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.1 OrthoFinder output from all 47 species
GSVIVT01006035001 ATSCO1/CPEF-G,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
Gb_36066 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.06 OrthoFinder output from all 47 species
LOC_Os04g45490.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.06 OrthoFinder output from all 47 species
Len_g12465 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Len_g18043 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02343 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Mp7g06620.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.07 OrthoFinder output from all 47 species
Msp_g07900 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.11 OrthoFinder output from all 47 species
Nbi_g06861 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.07 OrthoFinder output from all 47 species
Ore_g06596 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01363 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g07398 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g15053 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002734 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.05 OrthoFinder output from all 47 species
Sam_g17251 No alias translation elongation factor *(EF-G) & original... 0.04 OrthoFinder output from all 47 species
Solyc08g079180.3.1 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.03 OrthoFinder output from all 47 species
Spa_g05896 ATSCO1/CPEF-G,... translation elongation factor *(EF-G) & original... 0.06 OrthoFinder output from all 47 species
Spa_g45621 ATSCO1/CPEF-G,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007402_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.04 OrthoFinder output from all 47 species
Zm00001e041325_P001 ATSCO1/CPEF-G,... EF-G translation elongation factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 96 368
IPR000640 EFG_V-like 688 774
IPR041095 EFG_II 491 564
IPR004161 EFTu-like_2 411 478
IPR005517 Transl_elong_EFG/EF2_IV 566 684
No external refs found!