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  5. Tin_g01175

Tin_g01175


Description : component *(CWC21) of MAC spliceosome-associated complex & original description: none


Gene families : OG0003203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01175

Target Alias Description ECC score Gene Family Method Actions
Als_g28501 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Aob_g17747 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ceric.33G033500.1 Ceric.33G033500 component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Dac_g01005 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.07 OrthoFinder output from all 47 species
Dcu_g46607 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ehy_g04929 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Ehy_g10000 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.04 OrthoFinder output from all 47 species
Lfl_g04122 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.03 OrthoFinder output from all 47 species
Lfl_g29645 No alias component *(CWC21) of MAC spliceosome-associated complex... 0.05 OrthoFinder output from all 47 species
Mp1g28520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g092250.3.1 Solyc09g092250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025611_P001 Zm00001e025611 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 283 343
IPR017868 Filamin/ABP280_repeat-like 75 175
No external refs found!