Tin_g01086

Description : not classified & original description: none

Gene families : OG0002290 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002290_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g01086
Cluster	HCCA: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00109510	evm_27.TU.AmTr_v1...	Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera	0.05	OrthoFinder output from all 47 species
AT5G08650	No alias	Small GTP-binding protein	0.13	OrthoFinder output from all 47 species
Adi_g116309	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g02382	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g09651	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g02197	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g04580	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Azfi_s0072.g036902	No alias	not classified & original description: CDS=1-1971	0.03	OrthoFinder output from all 47 species
Ceric.02G059400.1	Ceric.02G059400	not classified & original description: pacid=50584081...	0.05	OrthoFinder output from all 47 species
Cre03.g165000	No alias	Translation factor GUF1 homolog, chloroplastic...	0.02	OrthoFinder output from all 47 species
Dac_g07140	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Dde_g11300	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01022409001	No alias	Translation factor GUF1 homolog, chloroplastic OS=Vitis vinifera	0.1	OrthoFinder output from all 47 species
LOC_Os02g06300.1	LOC_Os02g06300	Translation factor GUF1 homolog, chloroplastic OS=Oryza...	0.09	OrthoFinder output from all 47 species
Lfl_g03115	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Mp7g18810.1	No alias	Translation factor GUF1 homolog, chloroplastic OS=Vitis...	0.04	OrthoFinder output from all 47 species
Msp_g11300	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Nbi_g19015	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Ore_g09463	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g18021	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ppi_g43097	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g39971	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo407721	No alias	Translation factor GUF1 homolog, chloroplastic OS=Oryza...	0.05	OrthoFinder output from all 47 species
Solyc04g015450.3.1	Solyc04g015450	Translation factor GUF1 homolog, chloroplastic...	0.11	OrthoFinder output from all 47 species
Spa_g04229	No alias	not classified & original description: none	0.12	OrthoFinder output from all 47 species
Zm00001e025200_P002	Zm00001e025200	Translation factor GUF1 homolog, chloroplastic OS=Oryza...	0.09	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:1903825	organic acid transmembrane transport	IEP	HCCA
BP	GO:1905039	carboxylic acid transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000640	EFG_V-like	495	581
IPR000795	T_Tr_GTP-bd_dom	99	277
IPR013842	LepA_CTD	584	690
IPR004161	EFTu-like_2	301	371

External Links

No external refs found!

Tin_g01086

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation