Tin_g01076

Description : subunit eta *(CCT7) of CCT chaperonin folding complex & original description: none

Gene families : OG0006075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g01076

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00107630	evm_27.TU.AmTr_v1...	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
Adi_g113191	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.04	OrthoFinder output from all 47 species
Als_g10726	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.04	OrthoFinder output from all 47 species
Aob_g03439	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Aop_g01325	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0054.g033787	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Ceric.05G016500.1	Ceric.05G016500	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.07	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001371.8	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.02	OrthoFinder output from all 47 species
Cre01.g026550	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	OrthoFinder output from all 47 species
Dac_g09536	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.05	OrthoFinder output from all 47 species
Dcu_g14177	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.06	OrthoFinder output from all 47 species
Dde_g02238	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Len_g04756	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
MA_20110g0010	No alias	CCT7 subunit eta of CCT chaperonin folding complex	0.04	OrthoFinder output from all 47 species
Mp7g09680.1	No alias	CCT7 subunit eta of CCT chaperonin folding complex	0.02	OrthoFinder output from all 47 species
Msp_g08578	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.02	OrthoFinder output from all 47 species
Nbi_g00986	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Sam_g18786	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Sam_g27520	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.03	OrthoFinder output from all 47 species
Smo168086	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.04	OrthoFinder output from all 47 species
Solyc06g065520.3.1	Solyc06g065520	CCT7 subunit eta of CCT chaperonin folding complex	0.06	OrthoFinder output from all 47 species
Spa_g06049	No alias	subunit eta *(CCT7) of CCT chaperonin folding complex &...	0.04	OrthoFinder output from all 47 species
Zm00001e025196_P001	Zm00001e025196	CCT7 subunit eta of CCT chaperonin folding complex	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005839	proteasome core complex	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
MF	GO:0051011	microtubule minus-end binding	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/GroEL/TCP-1	36	527

External Links

No external refs found!

Tin_g01076

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation