Description : subunit epsilon *(CCT5) of CCT chaperonin folding complex & original description: none
Gene families : OG0005131 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005131_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Tin_g01058 | |
Cluster | HCCA: Cluster_141 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00173980 | evm_27.TU.AmTr_v1... | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.05 | OrthoFinder output from all 47 species | |
AT1G24510 | No alias | TCP-1/cpn60 chaperonin family protein | 0.06 | OrthoFinder output from all 47 species | |
Ceric.01G032800.1 | Ceric.01G032800 | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.05 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000571.47 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | OrthoFinder output from all 47 species | |
Cre03.g156750 | No alias | Cytoskeleton.actin and tubulin folding.CCT chaperonin... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03337 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g05555 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g26518 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g36700.1 | LOC_Os06g36700 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g19360 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.05 | OrthoFinder output from all 47 species | |
MA_10435597g0010 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.05 | OrthoFinder output from all 47 species | |
Mp7g17510.1 | No alias | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.02 | OrthoFinder output from all 47 species | |
Ore_g09320 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11702 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g013990.3.1 | Solyc05g013990 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.04 | OrthoFinder output from all 47 species | |
Spa_g12182 | No alias | subunit epsilon *(CCT5) of CCT chaperonin folding... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e011557_P001 | Zm00001e011557 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e032727_P001 | Zm00001e032727 | CCT5 subunit epsilon of CCT chaperonin folding complex | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000502 | proteasome complex | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005643 | nuclear pore | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005739 | mitochondrion | IEP | HCCA |
CC | GO:0005839 | proteasome core complex | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008312 | 7S RNA binding | IEP | HCCA |
BP | GO:0009894 | regulation of catabolic process | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
MF | GO:0030234 | enzyme regulator activity | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
BP | GO:0042176 | regulation of protein catabolic process | IEP | HCCA |
MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
MF | GO:0043022 | ribosome binding | IEP | HCCA |
MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
CC | GO:0048500 | signal recognition particle | IEP | HCCA |
BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1905368 | peptidase complex | IEP | HCCA |
CC | GO:1905369 | endopeptidase complex | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002423 | Cpn60/GroEL/TCP-1 | 40 | 531 |
No external refs found! |