Tin_g01017


Description : not classified & original description: none


Gene families : OG0003094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g01017
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
Als_g28490 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g60534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.26G007800.1 Ceric.26G007800 not classified & original description: pacid=50598857... 0.02 OrthoFinder output from all 47 species
Ceric.32G023300.1 Ceric.32G023300 not classified & original description: pacid=50598324... 0.04 OrthoFinder output from all 47 species
LOC_Os02g39970.1 LOC_Os02g39970 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g31325 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g117420.4.1 Solyc03g117420 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 202 224
IPR001611 Leu-rich_rpt 251 270
IPR001611 Leu-rich_rpt 299 318
IPR001611 Leu-rich_rpt 515 535
IPR001611 Leu-rich_rpt 441 457
IPR001611 Leu-rich_rpt 323 382
No external refs found!