Tin_g00982

Description : not classified & original description: none

Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g00982
Cluster	HCCA: Cluster_168

Target	Alias	Description	ECC score	Gene Family Method
AT1G14200	No alias	RING/U-box superfamily protein	0.11	OrthoFinder output from all 47 species
AT1G26800	No alias	RING/U-box superfamily protein	0.04	OrthoFinder output from all 47 species
AT1G55530	No alias	RING/U-box superfamily protein	0.03	OrthoFinder output from all 47 species
Cba_g13253	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.04	OrthoFinder output from all 47 species
Dac_g13479	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.06	OrthoFinder output from all 47 species
Ehy_g19575	No alias	RING-H2-class BTL-subclass E3 ubiquitin ligase &...	0.03	OrthoFinder output from all 47 species
LOC_Os07g43740.1	LOC_Os07g43740	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc05g007895.1.1	Solyc05g007895	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e010857_P001	Zm00001e010857	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	Interproscan
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	288	330
IPR039525	RNF126-like_zinc-ribbon	9	40

External Links

No external refs found!