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  5. Tin_g00772

Tin_g00772


Description : not classified & original description: none


Gene families : OG0002228 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002228_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00772

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00197p00037090 evm_27.TU.AmTr_v1... LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
AT3G17640 No alias Leucine-rich repeat (LRR) family protein 0.01 OrthoFinder output from all 47 species
AT4G03010 No alias RNI-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g057578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33682 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g32426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14895.t1 Aspi01Gene14895 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene39959.t1 Aspi01Gene39959 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g016011 No alias not classified & original description: CDS=1-1395 0.03 OrthoFinder output from all 47 species
Ceric.01G011300.1 Ceric.01G011300 not classified & original description: pacid=50591588... 0.03 OrthoFinder output from all 47 species
Ceric.19G015600.1 Ceric.19G015600 not classified & original description: pacid=50575532... 0.03 OrthoFinder output from all 47 species
Ceric.19G043000.1 Ceric.19G043000 not classified & original description: pacid=50575674... 0.06 OrthoFinder output from all 47 species
Dac_g09254 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01011042001 No alias LRR receptor-like serine/threonine-protein kinase ERECTA... 0.02 OrthoFinder output from all 47 species
GSVIVT01015897001 No alias LRR receptor-like serine/threonine-protein kinase RCH1... 0.02 OrthoFinder output from all 47 species
Gb_19042 No alias LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
LOC_Os05g33690.3 LOC_Os05g33690 LRR receptor-like serine/threonine-protein kinase ERL1... 0.03 OrthoFinder output from all 47 species
MA_29255g0010 No alias Probably inactive leucine-rich repeat receptor-like... 0.03 OrthoFinder output from all 47 species
MA_89273g0010 No alias Leucine-rich repeat receptor-like protein kinase PXL1... 0.02 OrthoFinder output from all 47 species
Msp_g09366 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g00776 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0165.g024101 No alias not classified & original description: CDS=786-2282 0.03 OrthoFinder output from all 47 species
Smo444337 No alias Probable LRR receptor-like serine/threonine-protein... 0.02 OrthoFinder output from all 47 species
Solyc06g084420.1.1 Solyc06g084420 LRR receptor-like serine/threonine-protein kinase ERECTA... 0.04 OrthoFinder output from all 47 species
Solyc07g042990.1.1 Solyc07g042990 Receptor protein-tyrosine kinase CEPR1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g13098 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39759 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50298 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g03294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e021093_P001 Zm00001e021093 Receptor-like protein kinase HSL1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027076_P001 Zm00001e027076 LRR receptor-like serine/threonine-protein kinase ERL2... 0.03 OrthoFinder output from all 47 species
Zm00001e032579_P001 Zm00001e032579 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 131 191
IPR013210 LRR_N_plant-typ 32 72
No external refs found!