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  5. Tin_g00737

Tin_g00737


Description : E3 ubiquiTin ligase & original description: none


Gene families : OG0000370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00737

Target Alias Description ECC score Gene Family Method Actions
AT3G47550 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 OrthoFinder output from all 47 species
Cba_g07518 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28103 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os11g38800.1 LOC_Os11g38800 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Solyc01g079530.4.1 Solyc01g079530 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e021220_P001 Zm00001e021220 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
CC GO:0017053 transcription repressor complex IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 142 187
IPR022143 DUF3675 199 304
No external refs found!