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  5. Tin_g00716

Tin_g00716


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00716

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00078670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AT2G22750 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene51171.t1 Aspi01Gene51171 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g51580.1 LOC_Os03g51580 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Lfl_g16271 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30933 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g25200.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Mp8g06230.1 BHLH42, TT8 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g48784 NAI1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08808 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091810.2.1 Solyc02g091810 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Zm00001e000934_P001 Zm00001e000934 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Zm00001e005173_P001 NAI1, Zm00001e005173 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 209 256
No external refs found!