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  5. Tin_g00435

Tin_g00435


Description : component *(eS12) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00435

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00079060 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT1G15930 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.05 OrthoFinder output from all 47 species
AT2G32060 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.06 OrthoFinder output from all 47 species
Adi_g102620 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g12283 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ala_g16289 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ala_g38702 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Aspi01Gene44625.t1 Aspi01Gene44625 component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0161.g054093 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Cba_g71372 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.37G058700.1 Ceric.37G058700 component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Ceric.37G058900.1 Ceric.37G058900 component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.34 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Cre04.g214503 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Dac_g03015 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g03474 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Dac_g25477 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dde_g13240 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ehy_g03052 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
GSVIVT01023591001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
GSVIVT01034219001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Gb_19269 No alias component RPS12 of SSU proteome 0.04 OrthoFinder output from all 47 species
Gb_38833 No alias component RPS12 of SSU proteome 0.06 OrthoFinder output from all 47 species
LOC_Os07g05580.1 LOC_Os07g05580 component RPS12 of SSU proteome 0.07 OrthoFinder output from all 47 species
LOC_Os07g12650.1 LOC_Os07g12650 component RPS12 of SSU proteome 0.08 OrthoFinder output from all 47 species
Lfl_g20839 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
MA_16920g0010 No alias component RPS12 of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp7g11470.1 No alias component RPS12 of SSU proteome 0.09 OrthoFinder output from all 47 species
Msp_g06773 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Nbi_g05093 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Nbi_g32162 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ppi_g20762 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015439 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g04208 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g18573 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Smo441919 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g103800.3.1 Solyc01g103800 component RPS12 of SSU proteome 0.07 OrthoFinder output from all 47 species
Solyc12g042650.2.1 Solyc12g042650 component RPS12 of SSU proteome 0.09 OrthoFinder output from all 47 species
Spa_g05809 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Spa_g05810 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Spa_g17185 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Spa_g22036 No alias component *(eS12) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Zm00001e009380_P001 Zm00001e009380 component RPS12 of SSU proteome 0.05 OrthoFinder output from all 47 species
Zm00001e033149_P001 Zm00001e033149 component RPS12 of SSU proteome 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 29 120
No external refs found!