Tin_g00363

Description : protein involved in PS-I assembly *(PPD1) & original description: none

Gene families : OG0006534 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006534_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g00363
Cluster	HCCA: Cluster_26

Target	Alias	Description	ECC score	Gene Family Method
AT4G15510	No alias	Photosystem II reaction center PsbP family protein	0.03	OrthoFinder output from all 47 species
Cre08.g362900	No alias	Photosynthesis.photophosphorylation.photosystem...	0.05	OrthoFinder output from all 47 species
Gb_02226	No alias	PPD1 protein involved in PS-I assembly	0.02	OrthoFinder output from all 47 species
LOC_Os07g17390.1	LOC_Os07g17390	PPD1 protein involved in PS-I assembly	0.03	OrthoFinder output from all 47 species
LOC_Os12g37710.1	LOC_Os12g37710	PPD1 protein involved in PS-I assembly	0.03	OrthoFinder output from all 47 species
Lfl_g08661	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.03	OrthoFinder output from all 47 species
MA_81231g0010	No alias	PPD1 protein involved in PS-I assembly	0.04	OrthoFinder output from all 47 species
Mp1g27590.1	No alias	PPD1 protein involved in PS-I assembly	0.03	OrthoFinder output from all 47 species
Nbi_g19709	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.03	OrthoFinder output from all 47 species
Spa_g12584	No alias	protein involved in PS-I assembly *(PPD1) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0019898	extrinsic component of membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006072	glycerol-3-phosphate metabolic process	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009538	photosystem I reaction center	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
BP	GO:0046168	glycerol-3-phosphate catabolic process	IEP	HCCA
BP	GO:0046434	organophosphate catabolic process	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
BP	GO:0052646	alditol phosphate metabolic process	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002683	PsbP_C	83	259

External Links

No external refs found!