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  5. Tin_g00288

Tin_g00288


Description : not classified & original description: none


Gene families : OG0002172 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002172_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00211870 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Adi_g040111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g39184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08019 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.29G019200.1 Ceric.29G019200 not classified & original description: pacid=50625656... 0.03 OrthoFinder output from all 47 species
Dde_g06960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g13576 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04626 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g40772 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09195 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11040 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g11993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007052 CS_dom 65 140
No external refs found!