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  5. Tin_g00215

Tin_g00215 (SUMO1, SUMO 1, ATSUMO1, SUM1)


Aliases : SUMO1, SUMO 1, ATSUMO1, SUM1

Description : SUMO ubiquiTin-fold protein & original description: none


Gene families : OG0001456 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g00215
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT4G26840 SUMO1, SUMO 1,... small ubiquitin-like modifier 1 0.02 OrthoFinder output from all 47 species
Ala_g00505 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33442.t1 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001278.6 SUMO1, SUMO 1,... Protein degradation.peptide... 0.01 OrthoFinder output from all 47 species
Mp2g04590.1 SUMO1, SUMO 1,... ubiquitin-fold protein (SUMO) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020707 SUMO1, SUMO 1,... SUMO ubiquitin-fold protein & original description: CDS=160-471 0.02 OrthoFinder output from all 47 species
Zm00001e028472_P001 SUMO1, SUMO 1,... ubiquitin-fold protein (SUMO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0030008 TRAPP complex IEP HCCA
MF GO:0035673 oligopeptide transmembrane transporter activity IEP HCCA
MF GO:0042887 amide transmembrane transporter activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1904680 peptide transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022617 Rad60/SUMO-like_dom 34 103
No external refs found!