Pir_g66517


Description : not classified & original description: none


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g66517
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00118310 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00244570 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
AT2G47150 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G29260 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g22149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0004.g008431 No alias not classified & original description: CDS=83-901 0.03 OrthoFinder output from all 47 species
Ceric.17G054700.1 Ceric.17G054700 not classified & original description: pacid=50617562... 0.02 OrthoFinder output from all 47 species
Ceric.17G061200.1 Ceric.17G061200 not classified & original description: pacid=50617800... 0.04 OrthoFinder output from all 47 species
Dac_g00544 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g22807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033916001 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
GSVIVT01036070001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_05034 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_13572 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_19302 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_29691 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_30465 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_30885 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Gb_35797 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_40683 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_41821 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61740.1 LOC_Os03g61740 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os04g10000.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10010.1 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46840.1 LOC_Os07g46840 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46860.1 LOC_Os07g46860 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46870.1 LOC_Os07g46870 Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46910.1 LOC_Os07g46910 Tropinone reductase-like 2 OS=Erythroxylum coca... 0.03 OrthoFinder output from all 47 species
LOC_Os12g16010.1 LOC_Os12g16010 Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g39462 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g00480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10120560g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_10436701g0020 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_107740g0010 ATA1, TA1, ASD Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_2492g0010 No alias xanthoxin oxidase (ABA2) 0.03 OrthoFinder output from all 47 species
MA_289156g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_656745g0010 No alias Tropinone reductase-like 1 OS=Erythroxylum coca... 0.02 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species
Mp3g24700.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.03 OrthoFinder output from all 47 species
Mp6g11590.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g42547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g43098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g39473 ATA1, TA1, ASD not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003562 No alias not classified & original description: CDS=1-426 0.03 OrthoFinder output from all 47 species
Solyc01g005500.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.05 OrthoFinder output from all 47 species
Solyc11g018600.1.1 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g17528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008253_P002 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!