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  5. ATCG01280

ATCG01280 (YCF2.2)


Aliases : YCF2.2

Description : Chloroplast Ycf2;ATPase, AAA type, core


Gene families : OG_01_0002711 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002711_tree ,
OG_02_0001740 (LandPlants) Phylogenetic Tree(s): OG_02_0001740_tree ,
OG_03_0001163 (SeedPlants) Phylogenetic Tree(s): OG_03_0001163_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG01280
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00543p00008950 evm_27.TU.AmTr_v1... Protein Ycf2 OS=Morus indica 0.04 Archaeplastida
Solyc00g500037.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc00g500046.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc00g500081.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc00g500128.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc00g500198.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc00g500327.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.13 Archaeplastida
Solyc01g017110.2.1 No alias No annotation 0.02 Archaeplastida
Solyc03g020090.1.1 No alias Protein Ycf2 OS=Daucus carota (sp|q0g9q1|ycf2_dauca : 187.0) 0.03 Archaeplastida
Solyc04g024540.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.06 Archaeplastida
Solyc10g019000.3.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.02 Archaeplastida
AMTR_s00543p00008950 evm_27.TU.AmTr_v1... Protein Ycf2 OS=Morus indica 0.04 LandPlants
Solyc00g500037.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc00g500046.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc00g500081.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc00g500128.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc00g500198.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc00g500327.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.12 LandPlants
Solyc01g017110.2.1 No alias No annotation 0.02 LandPlants
Solyc01g017290.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.02 LandPlants
Solyc03g020090.1.1 No alias Protein Ycf2 OS=Daucus carota (sp|q0g9q1|ycf2_dauca : 187.0) 0.03 LandPlants
Solyc04g024540.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.07 LandPlants
Solyc10g012230.1.1 No alias Protein Ycf2 OS=Solanum lycopersicum... 0.02 LandPlants
Solyc10g019000.3.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.02 LandPlants
Solyc12g035790.2.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.2 LandPlants
Solyc12g036000.1.1 No alias Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 189.0) 0.02 LandPlants
AMTR_s00543p00008950 evm_27.TU.AmTr_v1... Protein Ycf2 OS=Morus indica 0.04 SeedPlants
Solyc00g500037.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc00g500046.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc00g500081.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc00g500128.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc00g500198.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc00g500327.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.09 SeedPlants
Solyc01g017110.2.1 No alias No annotation 0.02 SeedPlants
Solyc01g017290.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.02 SeedPlants
Solyc03g020090.1.1 No alias Protein Ycf2 OS=Daucus carota (sp|q0g9q1|ycf2_dauca : 187.0) 0.03 SeedPlants
Solyc04g024540.1.1 No alias regulatory component YCF2 of AAA-ATPase motor complex 0.07 SeedPlants
Solyc06g048990.1.1 No alias Protein Ycf2 OS=Nicotiana tomentosiformis... 0.02 SeedPlants
Solyc12g036000.1.1 No alias Protein Ycf2 OS=Solanum tuberosum (sp|q27ry7|ycf2_soltu : 189.0) 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009507 chloroplast TAS Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008543 Uncharacterised_Ycf2 1 1494
IPR003959 ATPase_AAA_core 1644 1815
No external refs found!