ATCG01230 (RPS12B, RPS12)


Aliases : RPS12B, RPS12

Description : ribosomal protein S12B


Gene families : OG_01_0008675 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008675_tree ,
OG_02_0010189 (LandPlants) Phylogenetic Tree(s): OG_02_0010189_tree ,
OG_03_0010242 (SeedPlants) Phylogenetic Tree(s): OG_03_0010242_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG01230
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s02071p00004290 evm_27.TU.AmTr_v1... 30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa 0.05 Archaeplastida
AT2G07675 No alias Ribosomal protein S12/S23 family protein 0.06 Archaeplastida
ATMG00980 RPSL2 Ribosomal protein S12/S23 family protein 0.06 Archaeplastida
GSVIVT01002752001 No alias Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris 0.05 Archaeplastida
Gb_15254 No alias Ribosomal protein S7, mitochondrial OS=Triticum aestivum... 0.04 Archaeplastida
LOC_Os12g34062.1 No alias component mtRPS12 of small ribosomal subunit proteome 0.06 Archaeplastida
Mp6g00030.1 No alias no hits & (original description: none) 0.06 Archaeplastida
AMTR_s02071p00004290 evm_27.TU.AmTr_v1... 30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa 0.05 LandPlants
AT2G07675 No alias Ribosomal protein S12/S23 family protein 0.03 LandPlants
ATMG00980 RPSL2 Ribosomal protein S12/S23 family protein 0.03 LandPlants
GSVIVT01002752001 No alias Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris 0.05 LandPlants
LOC_Os12g34062.1 No alias component mtRPS12 of small ribosomal subunit proteome 0.02 LandPlants
Mp6g00030.1 No alias no hits & (original description: none) 0.06 LandPlants
AMTR_s02071p00004290 evm_27.TU.AmTr_v1... 30S ribosomal protein S12-B, chloroplastic OS=Populus trichocarpa 0.05 SeedPlants
GSVIVT01002752001 No alias Ribosomal protein S12, mitochondrial OS=Nicotiana sylvestris 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000312 plastid small ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome TAS Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!