ATCG01040 (YCF5)


Aliases : YCF5

Description : Cytochrome C assembly protein


Gene families : OG_01_0009186 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009186_tree ,
OG_02_0010209 (LandPlants) Phylogenetic Tree(s): OG_02_0010209_tree ,
OG_03_0011585 (SeedPlants) Phylogenetic Tree(s): OG_03_0011585_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG01040
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01004975001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.1 Archaeplastida
Gb_33050 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.19 Archaeplastida
LOC_Os06g46434.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.45 Archaeplastida
Solyc00g500085.1.1 No alias No annotation 0.53 Archaeplastida
Solyc00g500194.1.1 No alias Cytochrome c biogenesis protein CcsA OS=Solanum... 0.55 Archaeplastida
Solyc08g022180.1.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.53 Archaeplastida
Solyc11g021210.2.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 Archaeplastida
GSVIVT01004975001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.08 LandPlants
Gb_33050 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.19 LandPlants
LOC_Os06g46434.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.43 LandPlants
Solyc00g500085.1.1 No alias No annotation 0.52 LandPlants
Solyc00g500194.1.1 No alias Cytochrome c biogenesis protein CcsA OS=Solanum... 0.53 LandPlants
Solyc08g022180.1.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.52 LandPlants
Solyc11g021210.2.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 LandPlants
GSVIVT01004975001 No alias Photosynthesis.photophosphorylation.cytochrome b6/f... 0.09 SeedPlants
Gb_33050 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.19 SeedPlants
LOC_Os06g46434.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.44 SeedPlants
Solyc00g500085.1.1 No alias No annotation 0.49 SeedPlants
Solyc08g022180.1.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.49 SeedPlants
Solyc11g021210.2.1 No alias assembly factor CcsA of CCS cytochrome f/c6 maturation... 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0019684 photosynthesis, light reaction RCA Interproscan
BP GO:0030003 cellular cation homeostasis RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002541 Cyt_c_assembly 70 320
No external refs found!