ATCG01000 (YCF1.1)


Aliases : YCF1.1

Description : Ycf1 protein


Gene families : OG_01_0002413 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002413_tree ,
OG_02_0001662 (LandPlants) Phylogenetic Tree(s): OG_02_0001662_tree ,
OG_03_0001665 (SeedPlants) Phylogenetic Tree(s): OG_03_0001665_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG01000
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03506p00006730 No alias Protein TIC 214 OS=Populus trichocarpa 0.04 Archaeplastida
GSVIVT01029582001 No alias Protein TIC 214 OS=Vitis vinifera 0.08 Archaeplastida
Pp3c7_5000V3.1 No alias Ycf1 protein 0.05 Archaeplastida
Solyc00g500040.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc00g500043.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 Archaeplastida
Solyc00g500084.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.12 Archaeplastida
Solyc00g500126.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 Archaeplastida
Solyc00g500191.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc00g500278.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 Archaeplastida
Solyc00g500324.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.08 Archaeplastida
Solyc11g021280.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g021300.2.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.06 Archaeplastida
Solyc12g036550.3.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.48 Archaeplastida
AMTR_s03506p00006730 No alias Protein TIC 214 OS=Populus trichocarpa 0.04 LandPlants
GSVIVT01029582001 No alias Protein TIC 214 OS=Vitis vinifera 0.07 LandPlants
Pp3c7_5000V3.1 No alias Ycf1 protein 0.06 LandPlants
Solyc00g500040.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.04 LandPlants
Solyc00g500043.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 LandPlants
Solyc00g500084.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.12 LandPlants
Solyc00g500126.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 LandPlants
Solyc00g500191.1.1 No alias no hits & (original description: none) 0.07 LandPlants
Solyc00g500278.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.19 LandPlants
Solyc00g500324.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.08 LandPlants
Solyc08g043160.1.1 No alias Protein TIC 214 OS=Liriodendron tulipifera... 0.02 LandPlants
Solyc11g021280.2.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc11g021300.2.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.06 LandPlants
Solyc12g036550.3.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.48 LandPlants
AMTR_s03506p00006730 No alias Protein TIC 214 OS=Populus trichocarpa 0.04 SeedPlants
GSVIVT01029582001 No alias Protein TIC 214 OS=Vitis vinifera 0.07 SeedPlants
Solyc00g500040.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.04 SeedPlants
Solyc00g500043.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.15 SeedPlants
Solyc00g500084.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.11 SeedPlants
Solyc00g500126.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.15 SeedPlants
Solyc00g500190.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.02 SeedPlants
Solyc00g500191.1.1 No alias no hits & (original description: none) 0.07 SeedPlants
Solyc00g500278.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.15 SeedPlants
Solyc00g500324.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.08 SeedPlants
Solyc02g011850.3.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.02 SeedPlants
Solyc08g043160.1.1 No alias Protein TIC 214 OS=Liriodendron tulipifera... 0.02 SeedPlants
Solyc11g021300.2.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.06 SeedPlants
Solyc12g036550.3.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.45 SeedPlants

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008896 TIC214 21 342
No external refs found!