ATCG00730 (PETD)


Aliases : PETD

Description : photosynthetic electron transfer D


Gene families : OG_01_0007254 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007254_tree ,
OG_02_0006833 (LandPlants) Phylogenetic Tree(s): OG_02_0006833_tree ,
OG_03_0007078 (SeedPlants) Phylogenetic Tree(s): OG_03_0007078_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00730
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.08 Archaeplastida
LOC_Os01g57945.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 Archaeplastida
LOC_Os04g16844.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 Archaeplastida
LOC_Os08g15292.1 No alias component PetD/IV of cytochrome b6/f complex 0.07 Archaeplastida
LOC_Os10g21326.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 Archaeplastida
Mp1g00750.1 No alias Cytochrome b6-f complex subunit 4 OS=Pinus thunbergii... 0.1 Archaeplastida
Pp3c21_5670V3.1 No alias photosynthetic electron transfer D 0.06 Archaeplastida
Solyc00g500028.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.5 Archaeplastida
Solyc00g500073.1.1 No alias Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.44 Archaeplastida
Solyc00g500158.1.1 No alias component PetD/IV of cytochrome b6/f complex 0.48 Archaeplastida
Solyc01g017430.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.03 Archaeplastida
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.08 LandPlants
LOC_Os01g57945.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 LandPlants
LOC_Os04g16844.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 LandPlants
LOC_Os08g15292.1 No alias component PetD/IV of cytochrome b6/f complex 0.07 LandPlants
LOC_Os10g21326.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 LandPlants
Mp1g00750.1 No alias Cytochrome b6-f complex subunit 4 OS=Pinus thunbergii... 0.09 LandPlants
Pp3c21_5670V3.1 No alias photosynthetic electron transfer D 0.06 LandPlants
Solyc00g500028.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.49 LandPlants
Solyc00g500073.1.1 No alias Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.43 LandPlants
Solyc00g500158.1.1 No alias component PetD/IV of cytochrome b6/f complex 0.46 LandPlants
Solyc01g017430.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.03 LandPlants
Gb_03953 No alias component PetD/IV of cytochrome b6/f complex 0.08 SeedPlants
LOC_Os01g57945.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 SeedPlants
LOC_Os04g16844.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 SeedPlants
LOC_Os08g15292.1 No alias component PetD/IV of cytochrome b6/f complex 0.07 SeedPlants
LOC_Os10g21326.1 No alias component PetD/IV of cytochrome b6/f complex 0.49 SeedPlants
Solyc00g500028.1.1 No alias Cytochrome b6-f complex subunit 4 OS=Nymphaea alba... 0.46 SeedPlants
Solyc00g500073.1.1 No alias Cytochrome b6 OS=Helianthus annuus (sp|q1kxs9|cyb6_helan : 261.0) 0.41 SeedPlants
Solyc00g500158.1.1 No alias component PetD/IV of cytochrome b6/f complex 0.44 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009512 cytochrome b6f complex TAS Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009579 thylakoid IDA Interproscan
CC GO:0009579 thylakoid TAS Interproscan
BP GO:0010207 photosystem II assembly RCA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
BP GO:0019684 photosynthesis, light reaction TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005798 Cyt_b/b6_C 65 153
No external refs found!