ATCG00720 (PETB)

Aliases : PETB

Description : photosynthetic electron transfer B

Gene families : OG_01_0001809 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001809_tree ,
OG_02_0001335 (LandPlants) Phylogenetic Tree(s): OG_02_0001335_tree ,
OG_03_0004647 (SeedPlants) Phylogenetic Tree(s): OG_03_0004647_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: ATCG00720
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AT2G07727	No alias	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	0.06	Archaeplastida
GSVIVT01012279001	No alias	Cytochrome b OS=Zea mays	0.06	Archaeplastida
GSVIVT01018702001	No alias	Cytochrome b OS=Zea mays	0.05	Archaeplastida
Gb_16762	No alias	cytochrome b component of cytochrome c reductase complex	0.16	Archaeplastida
Gb_17283	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.17	Archaeplastida
Gb_20951	No alias	Cytochrome b OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
Gb_31169	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
Gb_36746	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.17	Archaeplastida
LOC_Os01g57942.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.48	Archaeplastida
LOC_Os04g16846.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.48	Archaeplastida
LOC_Os10g21324.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.48	Archaeplastida
Mp1g00740.1	No alias	Cytochrome b6 OS=Marchantia polymorpha...	0.11	Archaeplastida
Pp3c21_5650V3.1	No alias	photosynthetic electron transfer B	0.06	Archaeplastida
Smo137714	No alias	Cytochrome b6 OS=Pinus thunbergii	0.08	Archaeplastida
Smo139134	No alias	Cytochrome b OS=Marchantia polymorpha	0.1	Archaeplastida
Solyc00g047200.1.1	No alias	Cytochrome b OS=Solanum tuberosum (sp\|p29757\|cyb_soltu : 130.0)	0.08	Archaeplastida
Solyc00g500027.1.1	No alias	no hits & (original description: none)	0.52	Archaeplastida
Solyc00g500240.1.1	No alias	cytochrome b component of cytochrome c reductase complex	0.05	Archaeplastida
Solyc00g500260.1.1	No alias	cytochrome b component of cytochrome c reductase...	0.07	Archaeplastida
Solyc00g500364.1.1	No alias	cytochrome b component of cytochrome c reductase complex	0.05	Archaeplastida
Solyc01g017740.2.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc09g050020.3.1	No alias	Cytochrome b OS=Vicia faba (sp\|p05718\|cyb_vicfa : 382.0)	0.04	Archaeplastida
Zm00001e017084_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
Zm00001e023252_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
Zm00001e042123_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e042242_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
Zm00001e042335_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
Zm00001e042463_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	Archaeplastida
AT2G07727	No alias	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	0.03	LandPlants
GSVIVT01012279001	No alias	Cytochrome b OS=Zea mays	0.05	LandPlants
GSVIVT01018702001	No alias	Cytochrome b OS=Zea mays	0.04	LandPlants
Gb_16762	No alias	cytochrome b component of cytochrome c reductase complex	0.15	LandPlants
Gb_17283	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.17	LandPlants
Gb_20951	No alias	Cytochrome b OS=Oryza sativa subsp. japonica...	0.03	LandPlants
Gb_31169	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Gb_36746	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.16	LandPlants
LOC_Os01g57942.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	LandPlants
LOC_Os04g16846.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	LandPlants
LOC_Os10g21324.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	LandPlants
MA_10392603g0010	No alias	Cytochrome b OS=Arabidopsis thaliana...	0.02	LandPlants
Mp1g00740.1	No alias	Cytochrome b6 OS=Marchantia polymorpha...	0.1	LandPlants
Pp3c21_5650V3.1	No alias	photosynthetic electron transfer B	0.06	LandPlants
Smo137714	No alias	Cytochrome b6 OS=Pinus thunbergii	0.08	LandPlants
Smo139134	No alias	Cytochrome b OS=Marchantia polymorpha	0.08	LandPlants
Solyc00g047200.1.1	No alias	Cytochrome b OS=Solanum tuberosum (sp\|p29757\|cyb_soltu : 130.0)	0.04	LandPlants
Solyc00g500027.1.1	No alias	no hits & (original description: none)	0.52	LandPlants
Solyc00g500260.1.1	No alias	cytochrome b component of cytochrome c reductase...	0.04	LandPlants
Solyc01g017740.2.1	No alias	no hits & (original description: none)	0.02	LandPlants
Solyc09g050020.3.1	No alias	Cytochrome b OS=Vicia faba (sp\|p05718\|cyb_vicfa : 382.0)	0.03	LandPlants
Zm00001e017084_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Zm00001e023252_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Zm00001e042123_P001	No alias	no hits & (original description: none)	0.03	LandPlants
Zm00001e042242_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Zm00001e042335_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Zm00001e042463_P001	No alias	cytochrome b component of cytochrome c reductase complex	0.02	LandPlants
Gb_17283	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.17	SeedPlants
Gb_36746	No alias	Cytochrome b6 OS=Welwitschia mirabilis...	0.16	SeedPlants
LOC_Os01g57942.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	SeedPlants
LOC_Os04g16846.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	SeedPlants
LOC_Os10g21324.1	No alias	apocytochrome b component PetB of cytochrome b6/f complex	0.47	SeedPlants
Solyc00g500027.1.1	No alias	no hits & (original description: none)	0.48	SeedPlants
Solyc01g017740.2.1	No alias	no hits & (original description: none)	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	RCA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006354	DNA-templated transcription, elongation	RCA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009404	toxin metabolic process	None	Extended
BP	GO:0009407	toxin catabolic process	RCA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009512	cytochrome b6f complex	TAS	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	IDA	Interproscan
CC	GO:0009579	thylakoid	TAS	Interproscan
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	RCA	Interproscan
BP	GO:0009832	plant-type cell wall biogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010583	response to cyclopentenone	RCA	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015979	photosynthesis	RCA	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016049	cell growth	RCA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019684	photosynthesis, light reaction	RCA	Interproscan
BP	GO:0019684	photosynthesis, light reaction	TAS	Interproscan
BP	GO:0019748	secondary metabolic process	None	Extended
MF	GO:0020037	heme binding	TAS	Interproscan
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0030243	cellulose metabolic process	RCA	Interproscan
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0034357	photosynthetic membrane	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042546	cell wall biogenesis	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
CC	GO:0070069	cytochrome complex	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098754	detoxification	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005797	Cyt_b/b6_N	22	210

External Links

No external refs found!

ATCG00720 (PETB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation