ATCG00660 (RPL20)


Aliases : RPL20

Description : ribosomal protein L20


Gene families : OG_01_0002485 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002485_tree ,
OG_02_0010199 (LandPlants) Phylogenetic Tree(s): OG_02_0010199_tree ,
OG_03_0009132 (SeedPlants) Phylogenetic Tree(s): OG_03_0009132_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ATCG00660
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g15306.1 No alias component psRPL20 of large ribosomal subunit proteome 0.05 Archaeplastida
LOC_Os10g21314.1 No alias component psRPL20 of large ribosomal subunit proteome 0.07 Archaeplastida
Solyc00g180440.1.1 No alias component psRPL20 of large ribosomal subunit proteome 0.08 Archaeplastida
LOC_Os08g15306.1 No alias component psRPL20 of large ribosomal subunit proteome 0.05 LandPlants
LOC_Os10g21314.1 No alias component psRPL20 of large ribosomal subunit proteome 0.06 LandPlants
Solyc00g180440.1.1 No alias component psRPL20 of large ribosomal subunit proteome 0.08 LandPlants
LOC_Os08g15306.1 No alias component psRPL20 of large ribosomal subunit proteome 0.05 SeedPlants
LOC_Os10g21314.1 No alias component psRPL20 of large ribosomal subunit proteome 0.06 SeedPlants
Solyc00g180440.1.1 No alias component psRPL20 of large ribosomal subunit proteome 0.08 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000311 plastid large ribosomal subunit TAS Interproscan
MF GO:0003735 structural constituent of ribosome TAS Interproscan
BP GO:0006091 generation of precursor metabolites and energy RCA Interproscan
BP GO:0006354 DNA-templated transcription, elongation RCA Interproscan
BP GO:0006412 translation TAS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0015979 photosynthesis RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005813 Ribosomal_L20 3 108
No external refs found!